Glossory

• VCF: Variant Call Format

• SCI-VCF: Summarize, Compare and Interactively visualize the Variant Call Format

• SNP: Single Nucleotide Polymorphism (A -> T)

• INDEL: Insertions (A -> ATCC) and Deletions (ATCC -> A)

• MNP: Multi Nucleotide Polymorphisms (AA -> GT)